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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FDX1, Ferredoxin 1
Sequence ID:NM_004109
Entrez Gene ID:2230
Ensembl ID:ENSG00000137714

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 110300821 - 110333437

NM_004109 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1436110300593110301028
437561110306557110306681
562691110327641110327770
6923218110333077110335603

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3048743Full LengthBC010284ferredoxin 1
3883924Full LengthBC017063ferredoxin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004100  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004109 NP_004100 P10109 Fer2

Related Sequences

 
mRNAGenPeptSwissProt
M34788 AAA35829 P10109
M18003 AAA76853 P10109
J03548 AAA96806 P10109
BC010284 AAH10284 P10109
BC017063 AAH17063 P10109
BT006681 AAP35327 P10109

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FDX1 NP_004100 M.musculus Fdx1 14148 Gene Info NP_032022 78
R.norvegicus Fdx1 29189   NP_058822 78
D.melanogaster CG1319 38530   NP_647889 59
A.gambiae AgaP_AGAP003212 1273888   XP_312921 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)