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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NPTX1, neuronal pentraxin I
Sequence ID:NM_002522
Entrez Gene ID:4884
Ensembl ID:ENSG00000171246

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 78440947 - 78448498

NM_002522 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
142027844063278444833
420343827844553178445710
438346277844699978447243
462848357844931078449517
483654377844980278450403

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30555728Full LengthBC089441neuronal pentraxin I

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002522 NP_002513 Q15818 Pentaxin

Related Sequences

 
mRNAGenPeptSwissProt
U61849 AAC50727 Q15818
BC089441 AAH89441 Q15818
EU831849 ACE86608  
EU831771 ACE87289  
AK124701 BAG54073 B3KWB1
AK127335 BAG54485 Q15818

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NPTX1 NP_002513 R.norvegicus Nptx1 266777   NP_714957 96
M.musculus Nptx1 18164 Gene Info NP_032756 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)