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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. AP5S1, adaptor-related protein complex 5, sigma 1 subunit
Sequence ID:NM_001204446
NM_001204447
NM_018347
Entrez Gene ID:55317
Ensembl ID:ENSG00000125843

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 3801202 - 3805954

Transcript StartTranscript EndChromosomal Start Chromosomal End
120338012023801404
20439538027483802939
396183238045173805953

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5505030Full LengthBC043344chromosome 20 open reading frame 29

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204446 NP_001191375    
NM_001204447 NP_001191376    
NM_018347 NP_060817 Q9NUS5  

Related Sequences

 
mRNAGenPeptSwissProt
BC043344 AAH43344 Q9NUS5
AK002030 BAA92045 Q9NUS5
AK093332 BAG52692 Q9NUS5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AP5S1 NP_001191375 M.musculus 2310035K24Rik 69596 Gene Info NP_081405 85
R.norvegicus RGD1561852 499893   NP_001128090 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)