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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB20, RAB20, member RAS oncogene family
Sequence ID:NM_017817
Entrez Gene ID:55647
Ensembl ID:ENSG00000139832

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 111176011 - 111213866

NM_017817 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
231153111175413111176543
11541530111213694111214070

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4636491Full LengthBC026025RAB20, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060287  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017817 NP_060287 Q9NX57 Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC026025 AAH26025 Q9NX57
DQ892145 ABM83071  
DQ895340 ABM86266  
AK000436 BAA91163 Q9NX57
AK000446 BAA91171 Q9NX57
AJ272065 CAC81247 Q9NX57

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB20 NP_060287 M.musculus Rab20 19332 Gene Info NP_035357 83
R.norvegicus Rab20 689377   NP_001103005 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)