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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PHF12, PHD finger protein 12
Sequence ID:NM_001033561
NM_020889
Entrez Gene ID:57649
Ensembl ID:ENSG00000109118

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 27232270 - 27246180

 Exon Info From UCSC:
NM_001033561
NM_020889

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6157238Full LengthBC110882PHD finger protein 12
40117907Full LengthBC121043PHD finger protein 12
40117911Full LengthBC121044PHD finger protein 12
3356959IncompleteBC001657PHD finger protein 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065940  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033561 NP_001028733 Q96QT6  
NM_020889 NP_065940   PHD

Related Sequences

 
mRNAGenPeptSwissProt
BC001657 AAH01657 Q96QT6
BC110882 AAI10883 Q2TAK2
BC121043 AAI21044 Q0VAI6
BC121044 AAI21045 Q96QT6
AY030283 AAK38349 Q96QT6
AB040956 BAA96047 Q96QT6
AK024290 BAB14875 Q96QT6
AK160370 BAD18713 Q96QT6
AK291420 BAF84109 A8K5V5
AK294056 BAG57403 B4DFE2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHF12 NP_001028733 M.musculus Phf12 268448 Gene Info NP_777277 96
R.norvegicus Phf12 303274   NP_001013135 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)