Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TFPT, TCF3 (E2A) fusion partner (in childhood Leukemia)
Sequence ID:NM_013342
Entrez Gene ID:29844
Ensembl ID:ENSG00000105619

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 54610329 - 54619036

NM_013342 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
191755461031954610475
1763945461133254611550
3954645461163254611701
4655355461343354613503
5367945461782154618079
79512235461862654619054

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3616596Full LengthBC004281TCF3 (E2A) fusion partner (in childhood Leukemia)
4301790Full LengthBC007776TCF3 (E2A) fusion partner (in childhood Leukemia)
3354161IncompleteBC001728TCF3 (E2A) fusion partner (in childhood Leukemia)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013342 NP_037474 P0C1Z6  

Related Sequences

 
mRNAGenPeptSwissProt
AF052052 AAD45182 P0C1Z6
BC004281 AAH04281 P0C1Z6
BC007776 AAH07776 P0C1Z6
HQ447224 ADQ31711  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TFPT NP_037474 R.norvegicus Tfpt 85423   NP_620225 93
M.musculus Tfpt 69714 Gene Info NP_076013 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)