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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RTEL1, regulator of telomere elongation helicase 1
Sequence ID:NM_016434
NM_032957
Entrez Gene ID:51750
Ensembl ID:ENSG00000258366

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 62289162 - 62327597

 Exon Info From UCSC:
NM_016434
NM_032957

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057518  NP_116575  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016434 NP_057518 Q9NZ71 EC 3.6.4.12 ResIII
DEAD_2
NM_032957 NP_116575 Q9NZ71 EC 3.6.4.12 ResIII
DEAD_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF217795 AAF33687 Q9NZ71 EC 3.6.4.12
AK000485 BAA91197 Q9NZ71 EC 3.6.4.12
AK299332 BAG61337 Q9NZ71 EC 3.6.4.12
AK302508 BAG63785 Q9NZ71 EC 3.6.4.12
AK304798 BAG65548 Q9NZ71 EC 3.6.4.12
AL080127 CAB45725 Q9NZ71 EC 3.6.4.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RTEL1 NP_116575 R.norvegicus Rtel1 362288   XP_342603 77
M.musculus Rtel1 269400 Gene Info NP_001001882 77
A.gambiae RTEL1_ANOGA 1272449   XP_311162 43
D.melanogaster CG4078 31497   NP_572254 41
C.elegans rtel-1 172946   NP_492769 38
A.thaliana AT1G79950 844335   NP_178113 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)