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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UXS1, UDP-glucuronate decarboxylase 1
Sequence ID:NM_001253875
NM_001253876
NM_025076
NR_045607
Entrez Gene ID:80146
Ensembl ID:ENSG00000115652

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 106775009 - 106777258


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3843312Full LengthBC009819UDP-glucuronate decarboxylase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079352  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001253875 NP_001240804      
NM_001253876 NP_001240805      
NM_025076 NP_079352 Q8NBZ7 EC 4.1.1.35 Epimerase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC009819 AAH09819 Q8NBZ7 EC 4.1.1.35
AY147934 AAN39844 Q8NBZ7 EC 4.1.1.35
AY358541 AAQ88905 Q8NBZ7 EC 4.1.1.35
DQ893252 ABM84178    
DQ896581 ABM87580    
AK027244 BAB15705 Q8NBZ7 EC 4.1.1.35
AK075120 BAC11415 Q8NBZ7 EC 4.1.1.35
AK075170 BAC11448 Q8NBZ7 EC 4.1.1.35
AK290668 BAF83357 A8K3Q3  
AK122696 BAG53673 B3KV61  
AK304872 BAG65609 B4E3U7  
AL834439 CAD39099 Q8ND26  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UXS1 NP_079352 M.musculus Uxs1 67883 Gene Info NP_080706 99
R.norvegicus Uxs1 246232   NP_647552 97
A.gambiae AgaP_AGAP004268 1274113   XP_313190 71
D.melanogaster CG7979 38911   NP_648182 69
C.elegans sqv-1 177631   NP_501418 69
A.thaliana UXS6 817426   NP_973555 64
A.thaliana UXS5 823794   NP_001030820 64
A.thaliana UXS3 836047   NP_001078768 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)