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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C16orf70, chromosome 16 open reading frame 70
Sequence ID:NM_025187
Entrez Gene ID:80262
Ensembl ID:ENSG00000125149

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 67143865 - 67181034

 Exon Info From UCSC:
NM_025187

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3957147Full LengthBC004556chromosome 16 open reading frame 70

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079463  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025187 NP_079463 Q9BSU1 UPF0183

Related Sequences

 
mRNAGenPeptSwissProt
BC004556 AAH04556 Q9BSU1
AF176088 AAK96888 Q9BSU1
JF432121 ADZ15338  
AK022138 BAB13968 Q9BSU1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C16orf70 NP_079463 R.norvegicus RGD621098 207123   NP_620609 98
M.musculus D230025D16Rik 234678 Gene Info NP_663579 97
A.gambiae AgaP_AGAP003820 1271560   XP_310381 57
D.melanogaster CG7083 38943   NP_648211 57
A.thaliana AT3G51130 824277   NP_566945 39
C.elegans T01G9.2 172609   NP_492252 38
N.crassa NCU00928 3880907   XP_964754 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)