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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. UQCRFS1, ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
Sequence ID:NM_006003
Entrez Gene ID:7386
Ensembl ID:ENSG00000169021

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 29698294 - 29698852

NM_006003 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18992969816629699064
90012242970381129704135

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3345521Full LengthBC000649ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
3538225Full LengthBC010035ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
5285759Full LengthBC067832ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005994  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006003 NP_005994 P47985 EC 1.10.2.2 Rieske
UCR_TM

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC000649 AAH00649 P47985 EC 1.10.2.2
BC010035 AAH10035 P47985 EC 1.10.2.2
BC067832 AAH67832 P47985 EC 1.10.2.2
DQ891841 ABM82767    
HQ447986 ADQ32468    
AK291134 BAF83823 P47985 EC 1.10.2.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UQCRFS1 NP_005994 R.norvegicus Uqcrfs1 291103   NP_001008888 90
M.musculus Uqcrfs1 66694 Gene Info NP_079986 89
D.melanogaster RFeSP 44390   NP_722715 69
A.gambiae AgaP_AGAP008955 1279923   XP_319708 59
S.cerevisiae RIP1 856689   NP_010890 59
S.pombe rip1 2540075   NP_595941 59
N.crassa NCU06606 3878496   XP_962348 58
A.thaliana AT5G13430 831184   NP_568288 52
A.thaliana AT5G13440 831185   NP_196848 52
C.elegans isp-1 177609   NP_501361 50
P.falciparum PF14_0373 811955   XP_001348547 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)