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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CNOT2, CCR4-NOT transcription complex, subunit 2
Sequence ID:NM_001199302
NM_001199303
NM_014515
NR_037615
Entrez Gene ID:4848
Ensembl ID:ENSG00000111596

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 70637219 - 70748768


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3143289Full LengthBC002597CCR4-NOT transcription complex, subunit 2
3832035Full LengthBC011826CCR4-NOT transcription complex, subunit 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055330  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199302 NP_001186231    
NM_001199303 NP_001186232    
NM_014515 NP_055330 Q9NZN8 NOT2_3_5

Related Sequences

 
mRNAGenPeptSwissProt
AF161480 AAF29095 Q9NZN8
AF180473 AAF29827 Q9NZN8
AF113226 AAG39297 Q9NZN8
BC002597 AAH02597 Q9NZN8
BC011826 AAH11826 Q9NZN8
AF044215 AAQ13426 Q9NZN8
AY395696 AAR32245 Q6TKS8
EU446948 ABZ92477  
AK000662 BAA91313 Q9NZN8
AK129966 BAC85263 Q6ZP62
AK315715 BAG38074 B2RDX7
AK095789 BAG53128 B3KTL6
AL137674 CAB70869 Q9NZN8
BX641116 CAE46054 Q9NZN8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNOT2 NP_001186231 R.norvegicus Cnot2 299805   NP_001011988 100
M.musculus Cnot2 72068 Gene Info NP_001032935 100
A.gambiae AgaP_AGAP003525 1274183   XP_562364 49
D.melanogaster Rga 40683   NP_524239 44
A.thaliana AT1G07705 837284   NP_001077478 43
S.pombe not2 2538778   NP_587823 41
A.thaliana VIP2 836092   NP_568912 36
S.cerevisiae CDC36 851389   NP_010116 33
N.crassa NCU11372 5847192   XP_001728090 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)