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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL10A, ribosomal protein L10a
Sequence ID:NM_007104
Entrez Gene ID:4736
Ensembl ID:ENSG00000198755

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 35437982 - 35438558

NM_007104 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1393543617735436215
401143543657535436649
1151953543672335436803
1963443543715735437305
3455173543795535438127
5187193543835635438557

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2901249Full LengthBC006791ribosomal protein L10a
2986088Full LengthBC011366ribosomal protein L10a
6495090Full LengthBC070216ribosomal protein L10a
5395018IncompleteBC116456ribosomal protein L10a

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007104 NP_009035 P62906 Ribosomal_L1

Related Sequences

 
mRNAGenPeptSwissProt
U12404 AAA86463 P62906
BC006791 AAH06791 P62906
BC011366 AAH11366 P62906
BC070216 AAH70216 P62906
BC116456 AAI16457 Q1JQ76
BT020040 AAV38843 P62906
BT020041 AAV38844 P62906
DQ891130 ABM82056  
DQ894309 ABM85235  
AB082926 BAC16802 P62906
AK313181 BAG35998 P62906

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL10A NP_009035 R.norvegicus Rpl10a 81729   NP_112327 100
M.musculus Rpl10a 19896 Gene Info NP_035417 100
A.gambiae AgaP_AGAP011298 1270634   XP_309349 82
D.melanogaster RpL10Ab 39338   NP_648514 77
C.elegans rpl-1 171853   NP_491061 73
S.pombe rpl101 2539222   NP_587891 65
S.pombe rpl102 2540378   NP_596267 65
A.thaliana PGY1 817299   NP_850104 64
N.crassa NCU00294 3873856   XP_957765 64
A.thaliana AT5G22440 832305   NP_001078612 63
A.thaliana AT1G08360 837356   NP_563813 63
P.falciparum PF14_0391 811973   XP_001348565 63
S.cerevisiae RPL1A 855881   NP_015104 60
S.cerevisiae RPL1B 852742   NP_011380 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)