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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HS2ST1, Heparan sulfate 2-O-sulfotransferase 1
Sequence ID:NM_012262
NM_001134492
Entrez Gene ID:9653
Ensembl ID:ENSG00000153936

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 87380437 - 87575664

 Exon Info From UCSC:
NM_012262
NM_001134492

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4821110Full LengthBC025990heparan sulfate 2-O-sulfotransferase 1
4826825Full LengthBC025384heparan sulfate 2-O-sulfotransferase 1
5722244Full LengthBC108735heparan sulfate 2-O-sulfotransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036394  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134492 NP_001127964    
NM_012262 NP_036394 Q7LGA3 HS2ST

Related Sequences

 
mRNAGenPeptSwissProt
BC025384 AAH25384 Q7LGA3
BC025990 AAH25990 Q7LGA3
BC108735 AAI08736 Q7LGA3
JF432623 ADZ15840  
AB007917 BAA32293 Q7LGA3
AB024568 BAA89250 Q7LGA3
AK023260 BAG51177 B3KN15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HS2ST1 NP_036394 M.musculus Hs2st1 23908 Gene Info NP_035958 97
R.norvegicus Hs2st1 292155   NP_001093988 97
A.gambiae AgaP_AGAP008166 3291665   XP_317295 60
D.melanogaster Hs2st 44433   NP_477339 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)