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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SIAH1, siah E3 ubiquitin protein ligase 1
Sequence ID:NM_001006610
NM_003031
RefSeqGene ID:NG_029599
Entrez Gene ID:6477
Ensembl ID:ENSG00000196470

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 48397879 - 48399796

 Exon Info From UCSC:
NM_001006610
NM_003031

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5198176Full LengthBC042550seven in absentia homolog 1 (Drosophila)
5224755Full LengthBC035562seven in absentia homolog 1 (Drosophila)
5295925Full LengthBC044920seven in absentia homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001006611  NP_003022  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001006610 NP_001006611   Sina
NM_003031 NP_003022 Q8IUQ4 Sina

Related Sequences

 
mRNAGenPeptSwissProt
U63295 AAC12950 Q8IUQ4
U76247 AAC51907 Q8IUQ4
BC035562 AAH35562 Q8IUQ4
BC042550 AAH42550 Q8IUQ4
BC044920 AAH44920 Q8IUQ4
EF026094 ABK15529 Q8IUQ4
DQ890990 ABM81916  
DQ894167 ABM85093  
AK313861 BAG36589 B2R9P2
AK094663 BAG52904 B3KSZ2
AB451253 BAG70067 B5BU17
AB451377 BAG70191 B5BU17
BX647064 CAE46191 Q8IUQ4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SIAH1 NP_001006611 M.musculus Siah1a 20437 Gene Info NP_033198 100
R.norvegicus Siah1a 140941   NP_543181 100
D.melanogaster sina 39884   NP_730206 79
A.gambiae AgaP_AGAP006127 5667260   XP_001688791 78
C.elegans siah-1 177138   NP_500409 63
A.thaliana AT4G27880 828901   NP_194517 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)