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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HSPH1, heat shock 105kDa/110kDa protein 1
Sequence ID:NM_006644
Entrez Gene ID:10808
Ensembl ID:ENSG00000120694

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 31710764 - 31736032

 Exon Info From UCSC:
NM_006644

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4540927Full LengthBC037553heat shock 105kDa/110kDa protein 1
3913339IncompleteBC018124heat shock 105kDa/110kDa protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006635  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006644 NP_006635 Q92598 HSP70

Related Sequences

 
mRNAGenPeptSwissProt
AF039695 AAC18044 Q92598
BC037553 AAH37553 Q92598
DQ891727 ABM82653  
DQ894904 ABM85830  
D86956 BAA13192 Q92598
AB003333 BAA34779 Q92598
AB003334 BAA34780 Q92598
AK293955 BAG57329 B4DF68
AK302294 BAG63634 B4DY72
AK302430 BAG63733 B4DYH1
AK302832 BAG64026 B4DZB4
AK303029 BAG64155 B4DZP3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HSPH1 NP_006635 M.musculus Hsph1 15505 Gene Info NP_038587 94
R.norvegicus Hsph1 288444   NP_001011901 93
S.cerevisiae SSE2 852467   NP_009728 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)