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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FNDC3B, Fibronectin type III domain containing 3B
Sequence ID:NM_022763
NM_001135095
Entrez Gene ID:64778
Ensembl ID:ENSG00000075420

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 171758385 - 172118487

 Exon Info From UCSC:
NM_022763
NM_001135095

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5297602Full LengthBC039297fibronectin type III domain containing 3B
5577974IncompleteBC033635fibronectin type III domain containing 3B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_073600  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135095 NP_001128567    
NM_022763 NP_073600 Q53EP0 fn3

Related Sequences

 
mRNAGenPeptSwissProt
BC012204 AAH12204 Q53EP0
BC033635 AAH33635 Q53EP0
BC039297 AAH39297 Q53EP0
AF543840 AAN65261 Q53EP0
AY358146 AAQ88513 Q53EP0
AY358367 AAQ88733 Q53EP0
AK027052 BAB15639 Q53EP0
AK075220 BAC11480 Q53EP0
AB098597 BAC53727 Q53EP0
AK223599 BAD97319 Q53EP0
AK314478 BAG37083 Q53EP0
AK127826 BAG54580 Q53EP0
AL157482 CAB75672 Q53EP0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FNDC3B NP_073600 R.norvegicus Fndc3b 294925   XP_226988 93
M.musculus Fndc3b 72007 Gene Info NP_775274 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)