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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DDX3X, DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
Sequence ID:NM_001193416
NM_001193417
NM_001356
NM_024005
RefSeqGene ID:NG_012830
Entrez Gene ID:1654
Ensembl ID:ENSG00000215301

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.3-p11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 41193462 - 41207038

 Exon Info From UCSC:
NM_001193416
NM_001193417
NM_001356

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3617040Full LengthBC011819DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001347  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001193416 NP_001180345      
NM_001193417 NP_001180346      
NM_001356 NP_001347 O00571 EC 3.6.4.13 DEAD
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U50553 AAB95637 O00571 EC 3.6.4.13
AF061337 AAC34298 O00571 EC 3.6.4.13
AF000982 AAC51829 O00571 EC 3.6.4.13
AF000983 AAC51830 O00571 EC 3.6.4.13
BC011819 AAH11819 O00571 EC 3.6.4.13
AY776161 AAV52794 Q5S4N1  
AB208983 BAD92220 Q59GX6  
AK291153 BAF83842 O00571 EC 3.6.4.13
AK296906 BAG59462 B4DLA0  
AK297159 BAG59657 B4DLU5  
AK304661 BAG65436 B4E3C4  
AK304689 BAG65460 O00571 EC 3.6.4.13
AB451220 BAG70034 B5BTY4  
AB451343 BAG70157 B5BTY4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DDX3X NP_001347 M.musculus Ddx3x 13205 Gene Info NP_034158 99
D.melanogaster bel 45826   NP_536783 61
A.thaliana AT3G58570 825026   NP_191416 55
C.elegans Y71H2AM.19 190611   NP_497615 55
S.cerevisiae DBP1 855984   NP_015206 54
A.thaliana AT2G42520 818852   NP_181780 54
A.thaliana AT3G58510 825020   NP_001030884 54
C.elegans vbh-1 171888   NP_491112 53
A.gambiae AgaP_AGAP003047 1272904   XP_311826 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)