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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CALU, Calumenin
Sequence ID:NM_001199672
NM_001199671
NM_001219
NM_001130674
NM_001199673
NM_001199674
Entrez Gene ID:813
Ensembl ID:ENSG00000128595

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q32.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 128379439 - 128411528

 Exon Info From UCSC:
NM_001219
NM_001130674

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3507961Full LengthBC013383calumenin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001210  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130674 NP_001124146    
NM_001199671 NP_001186600    
NM_001199672 NP_001186601    
NM_001199673 NP_001186602    
NM_001199674 NP_001186603    
NM_001219 NP_001210 Q6IAW5
O43852
efhand

Related Sequences

 
mRNAGenPeptSwissProt
U67280 AAB97725 O43852
AF013759 AAC17216 Q6IAW5
O43852
AF257659 AAF76141 O43852
BC013383 AAH13383 Q6IAW5
O43852
AF345637 AAK72908 O43852
BT006826 AAP35472 Q6IAW5
O43852
BT020143 AAV38945 Q6IAW5
O43852
DQ892233 ABM83159  
DQ895434 ABM86360  
HM002604 ADG45004 O43852
HM002605 ADG45005 O43852
HM002606 ADG45006 D6QS49
HM002607 ADG45007 D6QS50
HM002609 ADG45009 D6QS52
HM002610 ADG45010 D6QS53
HM002611 ADG45011 D6QS54
HM002613 ADG45013 D6QS56
HM002615 ADG45015 D6QS58
HM002616 ADG45016 D6QS59
AK312446 BAG35353 Q6IAW5
AK027460 BAG51328 B3KNG6
AK056338 BAG51681 O43852
AK074862 BAG52017 B3KQF5
AK075089 BAG52065 B3KQK3
CR457039 CAG33320 Q6IAW5
O43852
CR541835 CAG46634 O43852
AM392586 CAL37464  
AM392589 CAL37467  
AM392627 CAL37505  
AM392679 CAL37557  
AM392710 CAL37588  
AM392818 CAL37696  
AM392956 CAL37834  
AM393000 CAL37878  
AM393029 CAL37907  
AM393109 CAL37987  
AM393182 CAL38060  
AM393263 CAL38141  
AM393389 CAL38267  
AM393458 CAL38335  
AM393759 CAL38634  
AM393816 CAL38691  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CALU NP_001186601 M.musculus Calu 12321 Gene Info NP_908942 99
R.norvegicus Calu 64366   NP_001029070 98
A.gambiae AgaP_AGAP010392 1272654   XP_311555 59
C.elegans calu-1 180769   NP_001024806 51
D.melanogaster scf 38145   NP_477392 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)