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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RRAGA, Ras-related GTP binding A
Sequence ID:NM_006570
Entrez Gene ID:10670
Ensembl ID:ENSG00000155876

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 19049424 - 19050599

NM_006570 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116481904937119051018

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3835186Full LengthBC006433Ras-related GTP binding A
4127714Full LengthBC009990Ras-related GTP binding A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006561  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006570 NP_006561 Q7L523 Gtr1_RagA

Related Sequences

 
mRNAGenPeptSwissProt
U41654 AAB63255 Q7L523
BC006433 AAH06433 Q7L523
BC009990 AAH09990 Q7L523
AK313023 BAG35858 Q7L523
X90529 CAA62131 Q7L523

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RRAGA NP_006561 M.musculus Rraga 68441 Gene Info NP_848463 100
R.norvegicus Rraga 117044   NP_446425 100
A.gambiae AgaP_AGAP002991 1272967   XP_311898 86
D.melanogaster RagA 41071   NP_649850 81
C.elegans raga-1 174726   NP_496415 67
S.pombe gtr1 2540954   NP_595414 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)