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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. THY1, Thy-1 cell surface antigen
Sequence ID:NM_006288
Entrez Gene ID:7070
Ensembl ID:ENSG00000154096

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 119288888 - 119293880

NM_006288 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6137513Full LengthBC065559Thy-1 cell surface antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006279  

Protein Infomation

NM_006288 NP_006279 P04216 ig

Related Sequences

S59749 AAB26353 P04216
AF261093 AAG13904 P04216
BC065559 AAH65559 P04216
DQ895011 ABM85937  
DQ895013 ABM85939  
EU176310 ABW03761  
AB209209 BAD92446 Q59GA0
AK314018 BAG36729 Q9HBB0
AK090644 BAG52205 B0YJA4
AK090996 BAG52259 B0YJA4
AL161958 CAB82306 P04216
AM393032 CAL37910  
AM393214 CAL38092  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens THY1 NP_006279 R.norvegicus Thy1 24832   NP_036805 71
M.musculus Thy1 21838 Gene Info NP_033408 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta