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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FXYD6, FXYD domain containing ion transport regulator 6
Sequence ID:NM_001164836
NM_001164832
NM_001164837
NM_022003
NM_001164831
NM_001204268
NM_001243598
RefSeqGene ID:NG_013071
Entrez Gene ID:53826
Ensembl ID:ENSG00000137726

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, soft tissue, spleen, stem cell, stomach, synovium, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 117707692 - 117709685

 Exon Info From UCSC:
NM_001164836
NM_001164832
NM_001164837
NM_022003
NM_001164831

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822864Full LengthBC018652FXYD domain containing ion transport regulator 6
6526843Full LengthBC093040FXYD domain containing ion transport regulator 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071286  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164831 NP_001158303    
NM_001164832 NP_001158304    
NM_001164836 NP_001158308    
NM_001164837 NP_001158309    
NM_001204268 NP_001191197    
NM_001243598 NP_001230527    
NM_022003 NP_071286 Q9H0Q3 ATP1G1_PLM_MAT8

Related Sequences

 
mRNAGenPeptSwissProt
BC018652 AAH18652 Q9H0Q3
BC093040 AAH93040 Q9H0Q3
BT006717 AAP35363 Q9H0Q3
AY358976 AAQ89335 Q9H0Q3
DQ893814 ABM84740  
DQ890638 ABM92255  
AK289629 BAF82318 Q9H0Q3
AK290757 BAF83446 Q9H0Q3
AL136699 CAB66634 Q9H0Q3
CR533457 CAG38488 Q9H0Q3
AL832811 CAI46171 Q9H0Q3
AM392911 CAL37789  
AM393115 CAL37993  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FXYD6 NP_001158303 M.musculus Fxyd6 59095 Gene Info NP_071287 94
R.norvegicus Fxyd6 63847   NP_071288 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)