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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CERS6, Ceramide synthase 6
Sequence ID:NM_001256126
NM_203463
Entrez Gene ID:253782
Ensembl ID:ENSG00000172292

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 169628309 - 169631638

Transcript StartTranscript EndChromosomal Start Chromosomal End
1294169312834169313127
295400169404105169404210
401531169417701169417831
532589169487494169487551
590640169547543169547593
641733169551468169551560
734862169571510169571638
863969169574381169574487
9701126169622101169622257
11276259169626019169631151

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40031838Full LengthBC109284LAG1 homolog, ceramide synthase 6
40031840Full LengthBC109285LAG1 homolog, ceramide synthase 6
4827066IncompleteBC035245LAG1 longevity assurance homolog 6 (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_982288  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256126 NP_001243055    
NM_203463 NP_982288 Q6ZMG9 LAG1

Related Sequences

 
mRNAGenPeptSwissProt
BC030800 AAH30800 Q6ZMG9
BC109284 AAI09285 Q32M63
BC109285 AAI09286 Q32M63
AK172775 BAD18757 Q6ZMG9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CERS6 NP_982288 R.norvegicus Cers6 366065   XP_345364 96
M.musculus Lass6 241447 Gene Info NP_766444 95
A.thaliana AT1G26200 3766796   NP_001154368 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)