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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OTX2, orthodenticle homeobox 2
Sequence ID:NM_001270523
NM_001270524
NM_001270525
NM_021728
NM_172337
NR_073034
NR_073036
RefSeqGene ID:NG_008204
Entrez Gene ID:5015
Ensembl ID:ENSG00000165588

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MICROPHTHALMIA, SYNDROMIC 5 
PITUITARY HORMONEDEFICIENCY, COMBINED, 6 

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 57267426 - 57272384

 Exon Info From UCSC:
NM_021728
NM_172337

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5493541Full LengthBC032579orthodenticle homeobox 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270523 NP_001257452    
NM_001270524 NP_001257453    
NM_001270525 NP_001257454    
NM_021728 NP_068374   Homeobox
TF_Otx
NM_172337 NP_758840 P32243 Homeobox
TF_Otx

Related Sequences

 
mRNAGenPeptSwissProt
AF093138 AAD31385 P32243
BC032579 AAH32579 P32243
DQ890875 ABM81801  
EU176492 ABW03293  
AK314271 BAG36932 P32243
AB593056 BAJ84003 F1T0C9
AB593057 BAJ84004 F1T0D0
AB593058 BAJ84005 F1T0D1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OTX2 NP_068374 R.norvegicus Otx2 305858   NP_001094036 100
M.musculus Otx2 18424 Gene Info NP_659090 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)