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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NUPL1, nucleoporin like 1
Sequence ID:NM_001008564
NM_014089
NM_001008565
Entrez Gene ID:9818
Ensembl ID:ENSG00000139496

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 25915286 - 25916544

 Exon Info From UCSC:
NM_001008564
NM_014089

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3504343Full LengthBC001104nucleoporin like 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008564 NP_001008564    
NM_014089 NP_054808 Q9BVL2  

Related Sequences

 
mRNAGenPeptSwissProt
BC001104 AAH01104 Q9BVL2
AB007870 BAA23706 Q9BVL2
AK123955 BAG53985 B3KW23
AK302946 BAG64103 B4DZJ1
AK303409 BAG64462 B4E0K0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NUPL1 NP_054808 M.musculus Nupl1 71844 Gene Info NP_733479 93
R.norvegicus Nupl1 245922   NP_620791 91
A.gambiae AgaP_AGAP008772 1275631   XP_314898 38
D.melanogaster Nup58 42342   NP_650821 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)