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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PSIP1, PC4 and SFRS1 interacting protein 1
Sequence ID:NM_033222
NM_001128217
NM_021144
Entrez Gene ID:11168
Ensembl ID:ENSG00000164985

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 15464064 - 15510982

 Exon Info From UCSC:
NM_033222
NM_001128217
NM_021144

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4838839Full LengthBC044568PC4 and SFRS1 interacting protein 1
6504372Full LengthBC064135PC4 and SFRS1 interacting protein 1
4932291IncompleteBC022971PC4 and SFRS1 interacting protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066967  NP_150091  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001128217 NP_001121689    
NM_021144 NP_066967   PWWP
NM_033222 NP_150091 O75475 PWWP

Related Sequences

 
mRNAGenPeptSwissProt
U94319 AAB52589 O75475
AF063020 AAC25167 O75475
AF098482 AAC97945 O75475
AF098483 AAC97946 O75475
BC022971 AAH22971 Q05CM9
BC033817 AAH33817 Q8N4N4
BC044568 AAH44568 O75475
BC064135 AAH64135 O75475
AF432220 AAL99926 O75475

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSIP1 NP_001121689 M.musculus Psip1 101739 Gene Info NP_598709 93
R.norvegicus Psip1 313323   NP_786941 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)