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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ARL6IP5, ADP-ribosylation-like factor 6 interacting protein 5
Sequence ID:NM_006407
Entrez Gene ID:10550
Ensembl ID:ENSG00000144746

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 69134183 - 69153787

NM_006407 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3510436Full LengthBC005143ADP-ribosylation-like factor 6 interacting protein 5
4134658Full LengthBC020797ADP-ribosylation-like factor 6 interacting protein 5
30318868IncompleteBC107899ADP-ribosylation-like factor 6 interacting protein 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006398  

Protein Infomation

NM_006407 NP_006398 O75915 PRA1

Related Sequences

AF070523 AAC64360 O75915
AF125530 AAF17224 O75915
AF161476 AAF29091 O75915
BC005143 AAH05143 O75915
BC020797 AAH20797 O75915
AY102608 AAM28950 O75915
AF115965 AAP97237 O75915
AB014765 BAC66462 O75915
AB097051 BAC77404 O75915
AB052638 BAD83603 O75915
AK223566 BAD97286 O75915
AK312731 BAG35602 O75915
AK074612 BAG51976 B3KQB4
AK301637 BAG63118 B4DWQ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens ARL6IP5 NP_006398 R.norvegicus Arl6ip5 66028   NP_076462 92
M.musculus Arl6ip5 65106 Gene Info NP_075368 90
D.melanogaster CG10373 35128   NP_609901 41
A.gambiae AgaP_AGAP005121 1274799   XP_001688502 39
C.elegans praf-3 177637   NP_001023104 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)