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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. OSTM1, osteopetrosis associated transmembrane protein 1
Sequence ID:NM_014028
RefSeqGene ID:NG_007262
Entrez Gene ID:28962
Ensembl ID:ENSG00000081087

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
OSTEOPETROSIS, AUTOSOMAL RECESSIVE 1TCIRG1

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 108364021 - 108375746

NM_014028 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
33432108362614108366043
34333598108370456108370621
35993766108372234108372401
37673864108375693108375790
38653979108385388108385502
39804467108395453108395940

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5298450Full LengthBC068581osteopetrosis associated transmembrane protein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014028 NP_054747 Q86WC4  

Related Sequences

 
mRNAGenPeptSwissProt
AF077205 AAD27000 Q86WC4
BC068581 AAH68581 Q86WC4
AF533891 AAO72749 Q86WC4
AY358795 AAQ89155 Q86WC4
AK075012 BAC11351 Q86WC4
BK000461 DAA00039 Q86WC4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OSTM1 NP_054747 M.musculus Ostm1 14628 Gene Info NP_766004 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)