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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PELI1, pellino E3 ubiquitin protein ligase 1
Sequence ID:NM_020651
Entrez Gene ID:57162
Ensembl ID:ENSG00000197329

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 64331829 - 64332375

NM_020651 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1626306431978764322401
263128196432325864323446
282030176432354664323743
301831196432753164327632
312032496433183464331963
325033896433537364335512
339037806437121464371604

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4992160Full LengthBC063611pellino homolog 1 (Drosophila)
5296990Full LengthBC050019pellino homolog 1 (Drosophila)
6187655IncompleteBC050533pellino homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065702  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020651 NP_065702 Q53T26
Q96FA3
Pellino

Related Sequences

 
mRNAGenPeptSwissProt
AF302505 AAG15393 Q53T26
Q96FA3
AF300987 AAG17451 Q53T26
Q96FA3
BC011419 AAH11419 Q96FA3
BC050019 AAH50019 Q53T26
Q96FA3
BC063611 AAH63611 Q53T26
Q96FA3
AY364257 AAQ76816 Q53T26
Q96FA3
HQ448508 ADQ32988  
AK027668 BAB55280 Q96FA3
AK312441 BAG35350 Q53T26
AJ278859 CAC04320 Q96FA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PELI1 NP_065702 M.musculus Peli1 67245 Gene Info NP_075813 100
R.norvegicus Peli1 305549   NP_001094035 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)