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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TSC22D3, TSC22 domain family, member 3
Sequence ID:NM_001015881
NM_004089
NM_198057
Entrez Gene ID:1831
Ensembl ID:ENSG00000157514

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 106956450 - 106960274

 Exon Info From UCSC:
NM_001015881
NM_004089
NM_198057

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6165765Full LengthBC072446TSC22 domain family, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_932174  NP_004080  NP_001015881  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001015881 NP_001015881 Q5JRJ2 TSC22
NM_004089 NP_004080 Q99576 TSC22
NM_198057 NP_932174   TSC22

Related Sequences

 
mRNAGenPeptSwissProt
AF153603 AAD41085 Q99576
AF183393 AAD56234 Q99576
AF228339 AAG12456 Q99576
BC018148 AAH18148 Q99576
Q5JRJ2
BC072446 AAH72446 Q99576
EU831739 ACE86573  
EU831656 ACE87256  
AB025432 BAB18680 Q99576
AK092645 BAC03934 Q99576
AK311834 BAG34776 B2R4H9
AK092669 BAG52587 Q99576
AK127938 BAG54599 B3KXT7
AK300535 BAG62243 B4DU81
Z50781 CAA90644 Q99576
Q5JRJ2
AL110191 CAB53669 Q99576
Q5JRJ1
CR533450 CAG38481 Q99576
Q5JRJ1
CR933650 CAI45951 Q99576

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TSC22D3 NP_932174 M.musculus Tsc22d3 14605 Gene Info NP_001070832 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)