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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. AP3S1, adaptor-related protein complex 3, sigma 1 subunit
Sequence ID:NM_001002924
NM_001284
Entrez Gene ID:1176
Ensembl ID:ENSG00000177879

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 115177734 - 115249187

Transcript StartTranscript EndChromosomal Start Chromosomal End
1185115177618115177802
186277115202366115202457
278389115205713115205824
390461115230783115230854
462569115238581115238688
5701287115249058115249775

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3452302Full LengthBC000804adaptor-related protein complex 3, sigma 1 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001275  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001284 NP_001275 Q92572 Clat_adaptor_s

Related Sequences

 
mRNAGenPeptSwissProt
U91932 AAD03779 Q92572
BC000804 AAH00804 Q92572
BT009833 AAP88835 Q92572
DQ891198 ABM82124  
DQ894381 ABM85307  
D63643 BAA09798 Q92572
AK311843 BAG34785 B2R4I8
X99458 CAA67823 Q92572
CR450341 CAG29337 Q92572

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AP3S1 NP_001275 M.musculus Ap3s1 11777 Gene Info NP_033811 100
S.pombe aps3 2542114   NP_593212 63
P.falciparum PFL2425w 811537   XP_001350889 51
N.crassa NCU09461 3879364   XP_963216 50
S.cerevisiae APS3 853429   NP_012510 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)