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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZDHHC21, zinc finger, DHHC-type containing 21
Sequence ID:NM_178566
Entrez Gene ID:340481
Ensembl ID:ENSG00000175893

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 14555480 - 14693281

NM_178566 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
280281461106914619095
802980721461963614619679
807381891463989314640009
819083281465874614658884
832984401466221214662323
844185391467282714672925
854087381467418414674382
873988681468003014680159
886989171469033414690382
891891711469322614693479

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4837003Full LengthBC042558zinc finger, DHHC-type containing 21

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848661  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178566 NP_848661 Q8IVQ6 zf-DHHC

Related Sequences

 
mRNAGenPeptSwissProt
AF161360 AAF28920 Q9P0D9
BC042558 AAH42558 Q8IVQ6
HQ447981 ADQ32464  
AK292960 BAF85649 Q8IVQ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZDHHC21 NP_848661 M.musculus Zdhhc21 68268 Gene Info NP_080923 98
R.norvegicus Zdhhc21 298184   NP_001034098 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)