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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ISYNA1, Inositol-3-phosphate synthase 1
Sequence ID:NM_016368
NM_001170938
NM_001253389
RefSeqGene ID:NG_031809
Entrez Gene ID:51477
Ensembl ID:ENSG00000105655

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 18545623 - 18548929

 Exon Info From UCSC:
NM_016368
NM_001170938

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4301272Full LengthBC018952inositol-3-phosphate synthase 1
5262041Full LengthBC066902inositol-3-phosphate synthase 1
3628145IncompleteBC004320inositol-3-phosphate synthase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057452  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001170938 NP_001164409      
NM_001253389 NP_001240318      
NM_016368 NP_057452 Q9NPH2 EC 5.5.1.4 Inos-1-P_synth
NAD_binding_5

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF220530 AAF26444 Q9NPH2 EC 5.5.1.4
AF207640 AAG35698 Q9NPH2 EC 5.5.1.4
BC004320 AAH04320 Q9NPH2 EC 5.5.1.4
BC018952 AAH18952 Q9NPH2 EC 5.5.1.4
BC066902 AAH66902 Q9NPH2 EC 5.5.1.4
AF086921 AAP97151 Q9NPH2 EC 5.5.1.4
DQ893465 ABM84391    
DQ896336 ABM87335    
AK001325 BAA91626 Q9NPH2 EC 5.5.1.4
AK021526 BAB13837 Q9NPH2 EC 5.5.1.4
AK092179 BAG52493 B3KRT1  
AK093461 BAG52722 B3KSG0  
AK296022 BAH12239 B7Z3K3  
AL137749 CAB70904 Q9NPH2 EC 5.5.1.4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ISYNA1 NP_057452 M.musculus Isyna1 71780 Gene Info NP_076116 89
R.norvegicus Isyna1 290651   NP_001013902 89
D.melanogaster Inos 35671   NP_477405 63
A.gambiae AgaP_AGAP011830 1280818   XP_320685 61
A.thaliana MIPS2 816757   NP_179812 61
A.thaliana MIPS3 830881   NP_196579 61
A.thaliana MIPS1 830139   NP_195690 59
C.elegans VF13D12L.1 174792   NP_496499 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)