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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPS28, ribosomal protein S28
Sequence ID:NM_001031
RefSeqGene ID:NG_028213
Entrez Gene ID:6234
Ensembl ID:ENSG00000233927

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 8386383 - 8387809

NM_001031 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17083863838386452
7111883865398386586
11925783868368386974
25838083871558387277

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2964364Full LengthBC000354ribosomal protein S28
4248660Full LengthBC070217ribosomal protein S28
4309752Full LengthBC021239ribosomal protein S28
6649143Full LengthBC070218ribosomal protein S28

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001022  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001031 NP_001022 P62857 Ribosomal_S28e

Related Sequences

 
mRNAGenPeptSwissProt
U58682 AAB07066 P62857
L05091 AAC15855 P62857
BC000354 AAH00354 P62857
BC021239 AAH21239 P62857
BC070217 AAH70217 P62857
BC070218 AAH70218 P62857
DQ891357 ABM82283  
DQ894538 ABM85464  
AB055779 BAB62873  
AK311925 BAG34866 B2R4R9
AK293636 BAG57092 B4DEI1
AK301638 BAG63119 B4DWQ7
CR457055 CAG33336 P62857

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPS28 NP_001022 R.norvegicus LOC689805 689805   XP_001072086 99
C.elegans rps-28 176975   NP_500115 87
A.gambiae AgaP_AGAP003412 1272785   XP_311696 86
S.pombe rps2802 2539085   NP_588343 84
S.pombe rps2801 2542751   NP_594526 84
A.thaliana RPS28 836535   NP_201219 80
D.melanogaster RpS28b 31897   NP_572568 79
A.thaliana AT5G03850 831692   NP_196005 78
A.thaliana AT3G10090 820170   NP_187620 78
N.crassa NCU05599 3876676   XP_960561 78
S.cerevisiae RPS28B 850969   NP_013366 76
S.cerevisiae RPS28A 854338   NP_014810 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)