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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHERP, calcium homeostasis endoplasmic reticulum protein
Sequence ID:NM_006387
RefSeqGene ID:NG_031959
Entrez Gene ID:10523
Ensembl ID:ENSG00000085872

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 16628699 - 16636244

 Exon Info From UCSC:
NM_006387

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4053575Full LengthBC021294calcium homeostasis endoplasmic reticulum protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006378  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006387 NP_006378 Q8IWX8 G-patch

Related Sequences

 
mRNAGenPeptSwissProt
U94836 AAB53327 Q8IWX8
BC021294 AAH21294 Q8IWX8
AF536542 AAN77183 Q8IWX8
AB209730 BAD92967 Q59ET1
AK296883 BAG59444 B4DL82
AK298408 BAG60636 B4DPM4
Y08265 CAA69591 Q8IWX8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHERP NP_006378 M.musculus Cherp 27967 Gene Info NP_613051 96
R.norvegicus Cherp 290614   NP_001099534 95
D.melanogaster scaf6 3346235   NP_001014589 41
A.gambiae AgaP_AGAP005953 3290075   XP_315991 40
C.elegans tag-65 179857   NP_506386 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)