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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CAV1, caveolin 1, caveolae protein, 22kDa
Sequence ID:NM_001172895
NM_001172896
NM_001172897
NM_001753
RefSeqGene ID:NG_012051
Entrez Gene ID:857
Ensembl ID:ENSG00000105974

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
LIPODYSTROPHY, CONGENITAL GENERALIZED, TYPE 3 

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 116166420 - 116201230

 Exon Info From UCSC:
NM_001172895
NM_001172896
NM_001172897
NM_001753

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5441212Full LengthBC082246caveolin 1, caveolae protein, 22kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001744  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172895 NP_001166366    
NM_001172896 NP_001166367    
NM_001172897 NP_001166368    
NM_001753 NP_001744 Q03135 Caveolin

Related Sequences

 
mRNAGenPeptSwissProt
BC009685 AAH09685 Q03135
BC082246 AAH82246 Q03135
BT007143 AAP35807 Q03135
AF172085 AAQ13608 Q7Z4F3
AY762103 AAX07830 Q2TNI1
DQ890647 ABM81573  
DQ893827 ABM84753  
EU176473 ABW03274  
EF649773 ABW22625 A9XTE5
EF649774 ABW22626 Q7Z4F3
AB209926 BAD93163 Q59E85
AK290871 BAF83560 Q2TNI1
AB451284 BAG70098 Q2TNI1
AB451416 BAG70230 Q2TNI1
Z18951 CAA79476 Q03135
AM393679 CAL38555 Q03135

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CAV1 NP_001744 M.musculus Cav1 12389 Gene Info NP_031642 95
R.norvegicus Cav1 25404   NP_113744 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta