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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLK2, CDC-like kinase 2
Sequence ID:NM_003993
Entrez Gene ID:1196
Ensembl ID:ENSG00000176444

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 155232670 - 155239154

 Exon Info From UCSC:
NM_003993

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3837777Full LengthBC014067CDC-like kinase 2
6007375Full LengthBC053603CDC-like kinase 2
3951841IncompleteBC006274CDC-like kinase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003984  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003993 NP_003984   Pkinase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L29216 AAA61481 P49760 EC 2.7.12.1
L29218 AAA61482 P49760 EC 2.7.12.1
BC006274 AAH06274 Q9BRG8  
BC014067 AAH14067 P49760 EC 2.7.12.1
BC053603 AAH53603 P49760 EC 2.7.12.1
AK291995 BAF84684 A8K7I0  
AK091036 BAG52265 B3KR53  
AK303696 BAH14022 B7Z8N6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLK2 NP_003984 M.musculus Clk2 12748 Gene Info NP_031738 97
R.norvegicus Clk2 365842   NP_001014276 97
D.melanogaster Doa 43415   NP_788758 62
A.thaliana FC2 828576   NP_194205 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)