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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. XIRP1, xin actin-binding repeat containing 1
Sequence ID:NM_001198621
NM_194293
Entrez Gene ID:165904
Ensembl ID:ENSG00000168334

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 39224706 - 39228564

Transcript StartTranscript EndChromosomal Start Chromosomal End
163103922470639231015
631164513923393639234076

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069068Full LengthBC172374xin actin-binding repeat containing 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001198621 NP_001185550    
NM_194293 NP_919269 Q702N8 Actin_bind_SAA

Related Sequences

 
mRNAGenPeptSwissProt
BC127119 AAI27120 Q702N8
BC139782 AAI39783 Q702N8
BC172374 AAI72374  
AY375160 AAQ64003 Q702N8
AK095941 BAC04655 Q702N8
AK096421 BAC04783 Q702N8
AK126299 BAC86519 Q702N8
AK122723 BAG53689 B3KV77
AJ271461 CAC81057 Q702N8
AL713648 CAD28459 Q702N8
AJ626899 CAF25191 Q702N8
AJ626900 CAF25192 Q702N8
CR749430 CAH18268 Q702N8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens XIRP1 NP_919269 M.musculus Xirp1 22437 Gene Info NP_035854 78
R.norvegicus Xirp1 316071   XP_236702 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)