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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC6A12, solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
Sequence ID:NM_001122847
NM_001122848
NM_001206931
NM_003044
Entrez Gene ID:6539
Ensembl ID:ENSG00000111181

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

 Exon Info From UCSC:
NM_001122847
NM_001122848
NM_003044

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991931Full LengthBC126215solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
8991933Full LengthBC126217solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001122847 NP_001116319    
NM_001122848 NP_001116320    
NM_001206931 NP_001193860    
NM_003044 NP_003035 P48065  

Related Sequences

 
mRNAGenPeptSwissProt
L42300 AAA66574 P48065
U27699 AAA87029 P48065
BC126215 AAI26216 P48065
BC126217 AAI26218 P48065
HQ258313 ADR83067  
AK131564 BAD18697 Q6ZMM8
AK313690 BAG36439 P48065
AK096046 BAG53203 B3KTU1
AK125026 BAG54125 B3KWG3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC6A12 NP_003035 M.musculus Slc6a12 14411 Gene Info NP_598422 88
R.norvegicus Slc6a12 50676   NP_059031 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)