Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STX6, syntaxin 6
Sequence ID:NM_005819
Entrez Gene ID:10228
Ensembl ID:ENSG00000135823

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 180913174 - 180945618

NM_005819 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
173620180942178180945781
36213715180953812180953906
37163822180957374180957480
38233948180959119180959244
39494011180962498180962560
40124106180971741180971835
41074276180974429180974598
42774548180991774180992045

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4122224Full LengthBC009944syntaxin 6

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005819 NP_005810 O43752 SNARE

Related Sequences

 
mRNAGenPeptSwissProt
BC009944 AAH09944 O43752
DQ891932 ABM82858  
DQ895119 ABM86045  
AK056657 BAB71242 Q96MP3
AK312440 BAG35349 O43752
AK299063 BAG61129 B4DR17
AJ002078 CAA05177 O43752
CR541856 CAG46654 O43752
CR541873 CAG46671 O43752

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STX6 NP_005810 M.musculus Stx6 58244 Gene Info NP_067408 95
R.norvegicus Stx6 60562   NP_113853 95
D.melanogaster Syx6 40373   NP_995814 54
A.gambiae AgaP_AGAP006251 1276910   XP_316317 52
A.thaliana SYP61 839749   NP_564310 29
N.crassa NCU01199 3877688   XP_961565 28
S.pombe tlg1 2540973   NP_595989 27
S.cerevisiae TLG1 852079   NP_010756 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)