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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC19A1, solute carrier family 19 (folate transporter), member 1
Sequence ID:NM_001205206
NM_001205207
NM_194255
NM_003056
RefSeqGene ID:NG_028278
Entrez Gene ID:6573
Ensembl ID:ENSG00000173638

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 46932480 - 46933941

Transcript StartTranscript EndChromosomal Start Chromosomal End
214274693462846936053
142815694694573046945871
157017714695068346950884
177225314695130246952061
253227694695768446957921
277028394696228146962350

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3509422Full LengthBC003068solute carrier family 19 (folate transporter), member 1
40114770IncompleteBC128247solute carrier family 19 (folate transporter), member 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001205206 NP_001192135    
NM_001205207 NP_001192136    
NM_194255 NP_919231 P41440 Folate_carrier

Related Sequences

 
mRNAGenPeptSwissProt
U17566 AAA74914 P41440
U15939 AAA98442 P41440
S78996 AAB35058 P41440
AF004354 AAB61417 P41440
U19720 AAC50180 P41440
BC003068 AAH03068 P41440
BC128247 AAI28248 A2VCN1
DQ891831 ABM82757  
DQ895016 ABM85942  
AB209069 BAD92306 Q59GP0
AK313125 BAG35945 P41440
AK303168 BAH13909 P41440

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC19A1 NP_919231 M.musculus Slc19a1 20509 Gene Info NP_112473 69
R.norvegicus Slc19a1 29723   NP_058995 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)