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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. B3GALT1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
Sequence ID:NM_020981
Entrez Gene ID:8708
Ensembl ID:ENSG00000172318

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 168725457 - 168727366

NM_020981 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1122168675181168675302
1232168168725320168727365

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069051Full LengthBC101545UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
8143816Full LengthBC104813UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066191  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020981 NP_066191 Q9Y5Z6 Galactosyl_T

Related Sequences

 
mRNAGenPeptSwissProt
AF117222 AAD23451 Q9Y5Z6
BC101545 AAI01546 Q9Y5Z6
BC104813 AAI04814 Q9Y5Z6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens B3GALT1 NP_066191 M.musculus B3galt1 26877 Gene Info NP_064679 100
R.norvegicus B3galt1 366064   NP_001102424 100
A.gambiae AgaP_AGAP002671 1273289   XP_312251 41
D.melanogaster CG30036 246408   NP_725096 39
D.melanogaster CG33145 36279   NP_788328 39
D.melanogaster CG30037 246409   NP_725097 36
A.thaliana GALT1 839224   NP_174003 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta