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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CSNK2B, casein kinase 2, beta polypeptide
Sequence ID:NM_001320
Entrez Gene ID:1460
Ensembl ID:ENSG00000204435

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 31633856 - 31636877

NM_001320 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13293163365631633984
3304123163459731634679
4135153163564431635746
5166313163631531636430
6327073163687331636948
7088973163709531637284
89811283163761231637842

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8327485Full LengthBC112017casein kinase 2, beta polypeptide
8327487Full LengthBC112019casein kinase 2, beta polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001311  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001320 NP_001311 P67870 CK_II_beta

Related Sequences

 
mRNAGenPeptSwissProt
BC112017 AAI12018 P67870
BC112019 AAI12020 P67870
AY113186 AAM50092 P67870
AK311860 BAG34801 P67870
AK300671 BAG62356 B4DUJ4
X16312 CAA34379 P67870
X16937 CAA34811 P67870
CR541699 CAG46500 P67870

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CSNK2B NP_001311 M.musculus Csnk2b 13001 Gene Info NP_034105 100
R.norvegicus Csnk2b 81650   NP_001030315 100
D.melanogaster CkIIbeta 32132   NP_996415 88
C.elegans kin-10 172610   NP_492254 82
S.pombe ckb1 2542564   NP_594606 64
A.thaliana CKB4 819076   NP_181996 58
A.thaliana CKB3 825196   NP_191584 56
N.crassa NCU02754 5847739   XP_001728406 53
S.cerevisiae CKB2 854204   NP_014682 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)