Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARL1, ADP-ribosylation factor-like 1
Sequence ID:NM_001177
Entrez Gene ID:400
Ensembl ID:ENSG00000120805

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    brain, cartilage, cerebrum, colon, embryonic tissue, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, muscle, nervous, pancreas, pancreatic islet, placenta, pooled tissue, prostate, stem cell, testis, uncharacterized tissue, uterus
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_001177 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
102535101786922101789447
25362714101790176101790354
27152826101794839101794950
28272908101796642101796723
29093046101799621101799758
30473199101801419101801571

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3960492Full LengthBC007000ADP-ribosylation factor-like 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177 NP_001168 P40616 Arf

Related Sequences

 
mRNAGenPeptSwissProt
L28997 AAC37567 P40616
BC007000 AAH07000 P40616
AF493887 AAM12601 P40616
BT007260 AAP35924 P40616
DQ893048 ABM83974  
DQ896295 ABM87294  
AK311793 BAG34736 P40616
AK299062 BAG61128 B4DR16
AK301701 BAG63173 B4DWW1
AK302911 BAG64079 B4DZG7
BX537387 CAD97629 P40616
AM393841 CAL38716  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARL1 NP_001168 M.musculus Arl1 104303 Gene Info NP_080135 99
R.norvegicus Arl1 64187   NP_071780 99
D.melanogaster Arf72A 39745   NP_524098 79
A.gambiae AgaP_AGAP011730 1280909   XP_320779 78
C.elegans arl-1 174375   NP_495816 72
A.thaliana ARF3 817014   NP_850057 65
N.crassa NCU08989 3875174   XP_959017 65
S.cerevisiae ARL1 852462   NP_009723 64
P.falciparum PF10_0337 810494   XP_001347621 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)