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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TRH, thyrotropin-releasing hormone
Sequence ID:NM_007117
RefSeqGene ID:NG_027816
Entrez Gene ID:7200
Ensembl ID:ENSG00000170893

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q13.3-q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 129693509 - 129696059

NM_007117 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1553129693113129693665
554772129694651129694869
7732007129695541129696775

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262227Full LengthBC069375thyrotropin-releasing hormone
30915244Full LengthBC074888thyrotropin-releasing hormone
30915475Full LengthBC074889thyrotropin-releasing hormone
40031770Full LengthBC110515thyrotropin-releasing hormone
40031772Full LengthBC110516thyrotropin-releasing hormone

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009048  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007117 NP_009048 P20396 TRH

Related Sequences

 
mRNAGenPeptSwissProt
BC069375 AAH69375 P20396
BC074888 AAH74888 P20396
BC074889 AAH74889 P20396
BC110515 AAI10516 P20396
BC110516 AAI10517 P20396
AK313473 BAG36258 P20396

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRH NP_009048 M.musculus Trh 22044 Gene Info NP_033452 62
R.norvegicus Trh 25569   NP_037178 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)