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Gene Info

Gene Information For:Hs. RP1, Retinitis pigmentosa 1 (autosomal dominant)
Sequence ID:NM_006269
RefSeqGene ID:NG_009840
Entrez Gene ID:6101
Ensembl ID:ENSG00000104237

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HYPERTRIGLYCERIDEMIAAPOA5
LIPI
RETINITIS PIGMENTOSA 1 

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 55528626 - 55543394

NM_006269 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11365552862655528761
1377635553351455534140
7649355553467655534847
93671005553722955543393

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069200Full LengthBC172506retinitis pigmentosa 1 (autosomal dominant)
100063098BC156507retinitis pigmentosa 1 (autosomal dominant)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006260  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006269 NP_006260 P56715 DCX

Related Sequences

 
mRNAGenPeptSwissProt
AF141021 AAD42072 P56715
AF143222 AAD44198 P56715
AF146592 AAD46769 P56715
BC156507 AAI56508  
BC172506 AAI72506  
DQ980612 ABJ97137 A0FDN2
DQ980613 ABJ97138 A0FDN2
DQ980614 ABJ97139 A0FDN2
DQ980615 ABJ97140 A0FDN2
AK098176 BAG53587 B3KUX5
AK302348 BAG63675 B4DYB3
AK304443 BAG65264 B4E2V2
AK316511 BAH14882 B7ZB46

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RP1 NP_006260 M.musculus Rp1 19888 Gene Info NP_035413 63
R.norvegicus Rp1 681377   XP_001061481 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)