Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TTF1, transcription termination factor, RNA polymerase I
Sequence ID:NM_001205296
NM_007344
Entrez Gene ID:7270
Ensembl ID:ENSG00000125482

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 135277375 - 135282224


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068174Full LengthBC167784transcription termination factor, RNA polymerase I
6500972IncompleteBC050734transcription termination factor, RNA polymerase I
6711040IncompleteBC104639transcription termination factor, RNA polymerase I
6711063IncompleteBC062692transcription termination factor, RNA polymerase I
40128771IncompleteBC127669transcription termination factor, RNA polymerase I
40128773IncompleteBC127670transcription termination factor, RNA polymerase I
40128775IncompleteBC143048transcription termination factor, RNA polymerase I
40128776IncompleteBC143049transcription termination factor, RNA polymerase I

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001205296 NP_001192225    
NM_007344 NP_031370 Q15361 Myb_DNA-binding

Related Sequences

 
mRNAGenPeptSwissProt
BC050734 AAH50734 Q15361
BC062692 AAH62692 Q15361
BC104639 AAI04640 Q15361
BC127669 AAI27670 Q15361
BC127670 AAI27671 Q15361
BC143048 AAI43049 Q15361
BC143049 AAI43050 Q15361
BC167784 AAI67784  
AK302902 BAG64074 B4DZG2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TTF1 NP_031370 M.musculus Ttf1 22130 Gene Info NP_033468 53
R.norvegicus Ttf1 499766   XP_575102 53
A.thaliana AT5G41020 834104   NP_198918 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)