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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TRNT1, tRNA nucleotidyl transferase, CCA-adding, 1
Sequence ID:NM_016000
NM_182916
Entrez Gene ID:51095
Ensembl ID:ENSG00000072756

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 3168656 - 3189868

Transcript StartTranscript EndChromosomal Start Chromosomal End
17531685993168673
7625031706973170871
25144431789433179136
44558331821933182331
58471031862673186393
71190431881133188306
905115831891333189386
1159227331895893190703

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4097092Full LengthBC012537tRNA nucleotidyl transferase, CCA-adding, 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_886552  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_182916 NP_886552   PolyA_pol

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF151805 AAD34042 Q96Q11 EC 2.7.7.72
BC005184 AAH05184 Q96Q11 EC 2.7.7.72
BC012537 AAH12537 Q96Q11 EC 2.7.7.72
EU832432 ACE86917    
EU832347 ACE87604    
AB063105 BAB70662 Q96Q11 EC 2.7.7.72
AK290411 BAF83100 Q96Q11 EC 2.7.7.72
AL834397 CAD39059 Q96Q11 EC 2.7.7.72
AM392669 CAL37547    
AM393260 CAL38138    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRNT1 NP_886552 M.musculus Trnt1 70047 Gene Info NP_081572 93
R.norvegicus Trnt1 312616   NP_001019432 92
A.gambiae AgaP_AGAP002600 1273369   XP_312336 52
D.melanogaster CG2100 40707   NP_649578 51
C.elegans F55B12.4 3565786   NP_001023976 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)