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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDKN1A, cyclin-dependent kinase inhibitor 1A (p21, Cip1)
Sequence ID:NM_000389
NM_001220777
NM_001220778
NM_078467
NR_037150
RefSeqGene ID:NG_009364
Entrez Gene ID:1026
Ensembl ID:ENSG00000124762

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

 Exon Info From UCSC:
NM_000389
NM_078467

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821049Full LengthBC000312cyclin-dependent kinase inhibitor 1A (p21, Cip1)
2822909Full LengthBC013967cyclin-dependent kinase inhibitor 1A (p21, Cip1)
2823668Full LengthBC001935cyclin-dependent kinase inhibitor 1A (p21, Cip1)
3355833Full LengthBC000275cyclin-dependent kinase inhibitor 1A (p21, Cip1)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000389 NP_000380 Q6FI05
P38936
CDI
NM_001220777 NP_001207706    
NM_001220778 NP_001207707    
NM_078467 NP_510867 Q6FI05
P38936
CDI

Related Sequences

 
mRNAGenPeptSwissProt
L25610 AAA16109 Q6FI05
P38936
L26165 AAA19811 Q6FI05
P38936
U09579 AAA85641 Q6FI05
P38936
S67388 AAB29246 Q6FI05
P38936
L47232 AAB59559 P38936
L47233 AAB59560 P38936
U03106 AAC04313 Q6FI05
P38936
BC000275 AAH00275 Q6FI05
P38936
BC000312 AAH00312 Q6FI05
P38936
BC001935 AAH01935 P38936
BC013967 AAH13967 P38936
BT006719 AAP35365 Q6FI05
P38936
AB209881 BAD93118 Q59ED0
AK298901 BAG61011 B4DQP9
AB451290 BAG70104 Q6FI05
AB451422 BAG70236 Q6FI05
CR536533 CAG38770 Q6FI05
P38936
AM392711 CAL37589  
AM392920 CAL37798  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDKN1A NP_510867 M.musculus Cdkn1a 12575 Gene Info NP_001104569 79
R.norvegicus Cdkn1a 114851   NP_542960 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta