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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ITGBL1, integrin, beta-like 1 (with EGF-like repeat domains)
Sequence ID:NM_001271754
NM_001271755
NM_001271756
NM_004791
Entrez Gene ID:9358
Ensembl ID:ENSG00000198542

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 102105012 - 102368789


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5753239Full LengthBC036788integrin, beta-like 1 (with EGF-like repeat domains)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004782  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271754 NP_001258683    
NM_001271755 NP_001258684    
NM_001271756 NP_001258685    
NM_004791 NP_004782 O95965 EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
AF072752 AAD17666 O95965
BC036788 AAH36788 O95965
AB008375 BAA22994 O14549
AK291340 BAF84029 O95965
AK095875 BAG53153 B3KTP1
AK297744 BAG60094 B4DN32
AK298571 BAG60764 B4DQ02
AL359052 CAB94388 O95965

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ITGBL1 NP_004782 M.musculus Itgbl1 223272 Gene Info NP_663442 91
R.norvegicus Itgbl1 498564   NP_001017505 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)