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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PEX10, peroxisomal biogenesis factor 10
Sequence ID:NM_002617
NM_153818
RefSeqGene ID:NG_008342
Entrez Gene ID:5192
Ensembl ID:ENSG00000157911

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PEROXISOME BIOGENESIS DISORDER 1A (ZELLWEGER)PEX1
PEX12
PEX13
PEX14
PEX19
PEX2
PEX26
PEX26
PEX3
PEX3
PEX5
PEX6
PEROXISOME BIOGENESIS DISORDER 2BPEX1
PEX13
PEX26
PEX26
PEX5
PEROXISOME BIOGENESIS DISORDER 6A (ZELLWEGER) 
PEROXISOME BIOGENESIS DISORDER 6B 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 2336258 - 2344010

 Exon Info From UCSC:
NM_002617
NM_153818

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3163782Full LengthBC000543peroxisomal biogenesis factor 10
3882695Full LengthBC018198peroxisomal biogenesis factor 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002608  NP_722540  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002617 NP_002608 O60683 zf-C3HC4
Pex2_Pex12
NM_153818 NP_722540   zf-C3HC4
Pex2_Pex12

Related Sequences

 
mRNAGenPeptSwissProt
AF060502 AAC18133 O60683
BC000543 AAH00543 O60683
BC018198 AAH18198 O60683
DQ891961 ABM82887  
DQ895151 ABM86077  
AB013818 BAA87895 O60683
AK124816 BAG54100 O60683
CR542077 CAG46874 Q6FGN0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PEX10 NP_722540 R.norvegicus Pex10 680424   NP_001102875 85
M.musculus Pex10 668173 Gene Info NP_001035866 83
D.melanogaster pex10 38182   NP_647624 36
A.thaliana PEX10 817175   NP_565621 35
A.gambiae AgaP_AGAP000928 1270411   XP_309110 32
S.cerevisiae PEX10 851858   NP_010551 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)